Generation Scotland: Scottish Family Health Study GWAS

Dataset

Download summary statistics: alcohol consumption, BMI, body fat percentage, diastolic blood pressure, pulse pressure, systolic blood pressure, serum urea, serum urate, total cholesterol, serum creatinine, fasting plasma glucose in diabetics and non-diabetics.

Download summary statistics: waist-hip ratio, height, heart rate, HDL cholesterol, fasting plasma glucose (non-diabetics).

Predicted effector genes-mccarthy

Submitted by dkjang on

These predictions synthesize multiple kinds of biological evidence to classify genes that are most likely to have direct roles in T2D risk and may represent potential drug targets. The “Combined prediction” column contains the classification of each gene’s potential to be causal based on the evidence contained in the table, as determined by Anubha Mahajan and Mark McCarthy. The classifications for potential T2D effectors are "Causal", "Strong", "Moderate", "Possible", and "Weak".

EGL method - richards

Submitted by dkjang on

The Effector Index (Ei) algorithm calculates the probability of causality for each gene at a locus that harbors genome-wide significant SNVs for a disease or trait.

Full documentation is available in: