GoDarts Illumina Infinium GWAS

Publications

Cohort Profile: Genetics of Diabetes Audit and Research in Tayside Scotland (GoDARTS).
Hébert HL, et al.
Int J Epidemiol. 2017 Sep 7. doi: 10.1093/ije/dyx140

Dataset phenotypes

  • adiponectin levels
  • BMI
  • total cholesterol
  • creatinine
  • diastolic blood pressure
  • eGFR-creat (serum creatinine)
  • HbA1c
  • HDL cholesterol
  • height
  • LDL cholesterol
  • leptin levels
  • triglycerides
  • type 2 diabetes
  • Urinary creatinine
  • waist circumference
  • weight

Project

GoDARTS (Genetics of Diabetes Audit and Research Study in Tayside Scotland) recruits consented T2D patients and matching controls from the region of Tayside, Scotland. Electronic medical record information, including lab values, is available for these participants.

Experiment summary

The GoDarts Illumina Infinium custom chip dataset contains 914 T2D subjects and 970 controls. Samples were genotyped using the Illumina infinium custom chip and imputed to HRC reference. Phenotypes were normalised using inverse rank-based normalisation on the residuals of a linear model adjusting for age, sex, and 4 Principal Components. The top 10 Principal Components were used as covariates in this analysis.

Dataset ID
GWAS_GODARTS_BROAD