FinnMetSeq exome sequence analysis

Publications

Exome sequencing of Finnish isolates enhances rare-variant association power.
Locke A, Meltz Steinberg K, Chiang, CWK, Service S, et al.
Nature. 2019 Jul 31. doi: 10.1038/s41586-019-1457-z

Dataset phenotypes

  • 2hr plasma free fatty acids
  • Acetate
  • Acetoacetate
  • Adiponectin
  • Alanine
  • Alcohol consumption
  • Beta-hydroxybutyric acid
  • Body fat percentage
  • BMI
  • Total cholesterol
  • Chylomicrons and XXL-VLDL cholesterol
  • Citrate
  • Serum creatinine
  • Diastolic blood pressure
  • Dicosahexaneoic acid
  • eGFR-creat (serum creatinine)
  • Fasting glucose
  • Fasting insulin
  • Fasting plasma free fatty acids
  • Glutamine
  • Glycerol
  • Glycine
  • Glycoproteins
  • HDL cholesterol
  • HDL2 cholesterol
  • HDL3 cholesterol
  • Height
  • Hip circumference adj BMI
  • Histidine
  • IDL cholesterol
  • Concentration of IDL particles
  • Isoleucine
  • LDL cholesterol
  • Leucine
  • Linoleic acid
  • Omega-3 fatty acids
  • Omega-6 fatty acids
  • Phosphocholines
  • Phenylalanine
  • Plasma C-reactive protein
  • Pulse pressure
  • Pyruvate
  • Remnant cholesterol
  • Serum albumin
  • Serum ApoA1
  • Serum ApoB
  • Triglycerides
  • Total cholines
  • Total phosphoglycerides
  • Two-hour glucose
  • Two-hour insulin
  • Tyrosine
  • Total monounsaturated fatty acids
  • Total polyunsaturated fatty acids
  • Systolic blood pressure
  • Total saturated fatty acids
  • Sphingomyelins
  • VLDL cholesterol
  • Valine
  • Vitamin D levels
  • Waist circumference adj BMI
  • Waist-hip ratio adj BMI
  • Weight

Dataset subjects

Subjects Cohort Ancestry
19,291 FINRISK and METabolic Syndrome In Men (METSIM) European

Experiment summary

In the FinnMetSeq study, exome sequences were determined for nearly 20,000 Finnish participants for whom multiple trait measures were available. The dataset includes variant associations for 63 quantitative traits.

Dataset ID
ExSeq_FinnMetSeq_eu