GIANT 2017 smoking-adjusted GWAS

Summary statistics are available for download at the GIANT Consortium website.

Publications

Genome-wide Meta-Analysis of 241,258 Adults Accounting for Smoking Behaviour Identifies Novel Loci for Obesity Traits.
Justice AE, et al.
Nat Commun. 2017; 8: 14977. doi: 10.1038/ncomms14977
PMID:28443625

Phenotypes

  • BMI adjusted for smoking status
  • Waist circumference adjusted for BMI-smoking status
  • Waist-hip ratio adjusted for BMI-smoking status

Subjects

GWAS cohorts

Subjects Cohort Ancestry
690 Athero_Express Biobank Study (AE) European
3,219 Age, Gene/Environment Susceptibility_Reykjavik Study (AGES) European
9,713 Atherosclerosis Risk in Communities (ARIC) European
3,207 Atherosclerosis Risk in Communities (ARIC) African American
2,166 Australian Twin_Family Studies (AUSTWIN) European
1,468 Busselton Health Study (BHS) European
2,026 The Charles Bronfman Institute for Personalized Medicine; BioMe Program (BioMe (MSSM)) European
3,495 The Charles Bronfman Institute for Personalized Medicine; BioMe Program (BioMe (MSSM)) African American
4,711 The Charles Bronfman Institute for Personalized Medicine; BioMe Program (BioMe (MSSM)) Hispanic
1,230 Baltimore Longitudinal Study of Aging (BLSA) European
6,481 British 1958 birth cohort (B58C) European
3,271 The Cardiovascular Health Study (CHS) European
1,895 Cebu Longitudinal Health and Nutrition Survey (Offspring) (CLHNS) East Asian
5,435 Cohorte Lausannoise (COLAUS) European
898 The CROATIA study, Korcula Island cohort (CROATIA_Korcula) European
924 The CROATIA study, Vis Island cohort (CROATIA_Vis) European
731 Data from an Epidemiological Study on the Insulin Resistance syndrome (DESIR) European
2,059 Estonian Genome Center, University of Tartu (EGCUT) European
2,417 EPIC (European Prospective Investigation into Cancer) Norfolk (EPIC_Norfolk) European
3,485 Erasmus Rucphen Family Study (ERF) European
3,869 Family Heart Study (FamHS) European
1,500 Fenland Study (Fenland) European
8,481 Framingham Heart Study (FramHS) European
2,333 Finland_United States Investigation of NIDDM Genetics (FUSION) European
1,026 Genetics of Diabetic Nephropathy (Gendian ) European
9,860 Generation Scotland (GS) European
1,509 Genetic Epidemiology Network of Arteriopathy (GENOA) European
941 Gothenburg Osteoporosis and Obesity Determinants Study (GOOD) European
671 Genetics of Overweight Young Adults (GOYA cases) European
790 Genetics of Overweight Young Adults (GOYA controls) European
499 Health, Risk Factors, Training and Genetics (HERITAGE) Family Study (HERITAGE Family Study) European
8,652 Health and Retirement Study (HRS) European
1,519 Health and Retirement Study (HRS) African American
3,916 HYPERGENES European
1,231 Invecchiare in Chianti (InCHIANTI) European
1,644 Cooperative Health Research in the Region of Augsburg (KORA3) European
1,814 Cooperative Health Research in the Region of Augsburg (KORA4) European
9,388 Lifelines Cohort study (Lifelines ) European
945 London Life Sciences Prospective Population Study (LOLIPOP_EW610) European
2,694 London Life Sciences Prospective Population Study (LOLIPOP_IA317) South Asian
7,032 London Life Sciences Prospective Population Study (LOLIPOP_IA610) South Asian
2,984 Ludwigshafen Risk and Cardiovascular Health Study (LURIC) European
2,399 Multi_Ethnic Study of Atherosclerosis (MESA) European
962 Osteoporotic Fractures in Men (MrOS) Sweden (MrOS Sweden) European
3,331 Netherlands Twin Register (NTR) European
5,402 Northern Finland Birth Cohorts 1966 (NFBC66 ) European
2,368 The Nurses' Health Study (NHS) European
889 Orkney Complex Disease Study (ORCADES) European
949 The Prospective Investigation of the Vasculature in Uppsala Seniors (PIVUS) European
3,649 Prevention of renal and vascular end_stage disease (Prevend) European
5,244 The PROspective study of Pravastatin in the Elderly at Risk for vascular disease (PROSPER) European
929 Quebec Family Study (QFS) European
5,974 Rotterdam Study _ I (Rotterdam Study I ) European
2,157 Rotterdam Study _ II (Rotterdam Study II ) European
2,078 Rotterdam Study _ III (Rotterdam Study III ) European
4,694 SardiNIA Study on Aging (SardiNIA) European
4,081 Study of Health in Pomerania (SHIP) European
1,000 The Hellenic study of Interactions between Snps and Eating in Atherosclerosis Susceptibility (THISEAS) European
1,354 Tracking Adolescents' Individual Lives Survey (TRAILS ) European
5,654 TwinsUK European
23,294 Women's Genome Health Study (WGHS) European
2,442 The Cardiovascular Risk in Young Finns Study (YFS) European

Metabochip cohorts

Subjects Cohort Ancestry
4,993 Data from an Epidemiological Study on the Insulin Resistance syndrome (DESIR) European
1,250 DR's EXTRA European
2,510 Estonian Genome Center, University of Tartu (EGCUT Metabochip) European
1,602 MRC Ely Study (Ely) European
1,700 European Prospective Investigation into Cancer and Nutrition _ Obesity Study (EPIC) European
3,217 Fenland Study (Fenland( European
2,014 Finland_United States Investigation of NIDDM Genetics (FUSION2) European
6,064 Gene x Lifestyle Interactions and Complex Traits Involved in Elevated Disease Risk (GLACIER) European
613 Gene By Environment (GXE) Jamaican
3,207 Health2006 European
1,567 The Nord_Trøndelag Health Study (HUNT) European
3,426 Carotid Intima Media Thickness (IMT) and IMT_PRogression as Predictors of Vascular Events in a High_Risk European Population (IMPROVE) European
6,127 Inter99 (I99) European
3,113 Cooperative Health Research in the Region of Augsburg (KORA S3) European
3,028 Cooperative Health Research in the Region of Augsburg (KORA S4) European
  The Multiethnic Cohort Study (MEC) African American
2,162 Metabolic Syndrome In Men (METSIM) European
2,476 MRC National Survey of Health & Development (NSHD) European
2,899 Stockholm Coronary Atherosclerosis Risk Factor_ Stockholm Heart Epidemiology Program (SCARFSHEEP) European
476 Spanish Town (SPT) Jamaican
5,711 Women's Health Initiative Study (WHI) African American
2,413 The Whitehall II study (Whitehall) European

Project

Genetic Investigation of ANthropometric Traits (GIANT) consortium Learn more >

GIANT is an international collaboration that seeks to identify genetic loci that modulate human body size and shape, including height and measures of obesity.

Experiment summary

This study is a meta-analysis of up to 79 studies comprising up to 241,258 individuals with HapMap II imputed genome-wide chip data and/or with genotyped MetaboChip data, aiming to determine the influence of smoking on weight and central adiposity. Genetic associations for BMI, waist circumference, and waist-hip ratio were analyzed after adjusting for smoking behavior. Subsets including females, males, Europeans, European females, and European males are available in the Portal.

Dataset ID
GWAS_GIANTxSMK