Obstructive sleep apnea GWAS

Download summary statistic files:

Apnea-hypopnea index - all associations
Apnea-hypopnea index - females
Apnea-hypopnea index - males
Apnea-hypopnea index - European Americans
Apnea-hypopnea index - European Americans, females
Apnea-hypopnea index - European Americans, males
Apnea-hypopnea index in NREM sleep - all associations
Apnea-hypopnea index in NREM sleep - females
Apnea-hypopnea index in NREM sleep - males
Apnea-hypopnea index in NREM sleep - European Americans
Apnea-hypopnea index in NREM sleep - European Americans, females
Apnea-hypopnea index in NREM sleep - European Americans, males
Apnea-hypopnea index in REM sleep - all associations
Apnea-hypopnea index in REM sleep - females
Apnea-hypopnea index in REM sleep - males
Apnea-hypopnea index in REM sleep - European Americans
Apnea-hypopnea index in REM sleep - European Americans, females
Apnea-hypopnea index in REM sleep - European Americans, males

 

Publications

Multiethnic Meta-Analysis Identifies RAI1 as a Possible Obstructive Sleep Apnea-related Quantitative Trait Locus in Men.
Chen H, et al.
Am J Respir Cell Mol Biol. 2018 Mar;58(3):391-401. doi: 10.1165/rcmb.2017-0237OC

Phenotypes

  • Apnea-Hypopnea Index
  • Apnea-Hypopnea Index in REM sleep
  • Apnea-Hypopnea Index in NREM sleep

Subjects

Samples Cohort Ancestry
1,463 Atherosclerosis Risk in Communities Study (ARIC) European
731 Cleveland Family Study (CFS) African American
702 Cleveland Family Study (CFS) European
646 Framingham Heart Study (Framingham) European
11,317 Hispanic Community Health Study/Study of Latinos (HCHS/SOL) Hispanic
490 Multi-Ethnic Study of Atherosclerosis (MESA) African American
228 Multi-Ethnic Study of Atherosclerosis (MESA) Asian American
707 Multi-Ethnic Study of Atherosclerosis (MESA) European
458 Multi-Ethnic Study of Atherosclerosis (MESA) Hispanic
782 Starr County Health Studies (Starr) European
2,209 Osteoporotic Fractures in Men Study (MrOS) European

Experiment summary

This study determined genetic associations with the Apnea-Hypopnea Index (AHI), a count of the number of total (apnea) and partial (hypopnea) breathing pauses per hour. Hypopnea was defined as having 3% or greater oxyhemoglobin desaturation. All phenotypes were rank-normalized, adjusting for age, age2, sex, age x sex, BMI, and BMI2. Mixed linear models (GEMMA) were used and were adjusted for genomic-control at a cohort level before running METAL.

Dataset ID
GWAS_OSA