SDKP Downloads

View downloads across all diseases and traits on the Association to Function Knowledge Portal Downloads page.

Dataset name in SDKPPublicationPhenotypesDownload
(Dataset not incorporated into the SDKP)Nightmares share genetic risk factors with sleep and psychiatric traits.
Ollila HM, Sinnott-Armstrong N, Kantojärvi K, Broberg M et al.

Transl Psychiatry. 2024 Feb 27;14(1):123. doi: 10.1038/s41398-023-02637-6.
PMID:38413574
NightmaresDownload files
(Dataset not integrated into SDKP)Genetic analysis of dietary intake identifies new loci and functional links with metabolic traits.
Merino J, Dashti HS, Sarnowski C, et al.
Nat Hum Behav. 2022 Jan;6(1):155-163. doi: 10.1038/s41562-021-01182-w.
PMID: 34426670
Nutrient preference

Download files

README

TOPMed Sleep Apnea WGSWhole-genome association analyses of sleep-disordered breathing phenotypes in the NHLBI TOPMed program.
Cade BE, et al.

Genome Med. 2021 Aug 26;13(1):136. doi: 10.1186/s13073-021-00917-8..
PMID:34446064
Sleep-disordered breathingDownload files
Neck circumference 2021 GWASGenome-Wide Association Study of Neck Circumference Identifies Sex-Specific Loci Independent of Generalized Adiposity.
Liu Y, et al.

Int J Obes (Lond). 2021 Jul;45(7):1532-1541. doi: 10.1038/s41366-021-00817-2.
PMID:33907307
Neck circumferenceDownload files | README
UK Biobank Sleep Traits GWAS: Self-report (naps associations)Genetic determinants of daytime napping and effects on cardiometabolic health.
Dashti HS, et al.

Nat Commun. 2021 Feb 10;12(1):900. doi: 10.1038/s41467-020-20585-3.
PMID:33568662
NappingDownload files and README
Finnish population chronotype GWASGenetic Associations of Chronotype in the Finnish General Population.
Maukonen M, et al.

J Biol Rhythms 2020 Jun 24;748730420935328. doi: 10.1177/0748730420935328.
PMID:32579418
ChronotypeSingle item chronotype |
Binary sMEQ score |
Continuous sMEQ score |
README
UK Biobank Sleep Traits GWAS: Self-report (daytime sleepiness associations)Genome-wide association analysis of self-reported daytime sleepiness identifies 42 loci that suggest biological subtypes.
Wang H, et al.

Nat Commun. 2019 Aug 13;10(1):3503. doi: 10.1038/s41467-019-11456-7.
PMID:31409809
Daytime sleepinessDaytime sleepiness associations | README
Daytime sleepiness adj BMI associations | README
Breakfast skipping GWASGenome-wide association study of breakfast skipping links clock regulation with food timing.
Dashti HS, et al.

Am J Clin Nutr. 2019 Aug 1;110(2):473-484. doi: 10.1093/ajcn/nqz076.
PMID:31190057
Breakfast skippingDownload files and README
UK Biobank Sleep GWAS: Accelerometer-derivedGenetic studies of accelerometer-based sleep measures yield new insights into human sleep behaviour.
Jones SE, et al.

Nat Commun. 2019 Apr 5;10(1):1585. doi: 10.1038/s41467-019-09576-1.
PMID:30952852
Sleep measuresDownload file | README
Sleeping oxyhemoglobin saturation GWASAssociations of Variants In the Hexokinase 1 and Interleukin 18 Receptor Regions with Oxyhemoglobin Saturation During Sleep.
Cade BE, et al.

PLoS Genet. 2019 Apr 16;15(4):e1007739. doi: 10.1371/journal.pgen.1007739.
PMID:30990817
SpO2Average SpO2 associations | Minimum SpO2 associations | Percentage of sleep with SpO2 < 90% associations | README
UK Biobank Sleep Traits GWAS: Self-report (insomnia associations)Biological and clinical insights from genetics of insomnia symptoms.
Lane J, et al.
Nat Genet. 2019 Mar;51(3):387-393. doi: 10.1038/s41588-019-0361-7.
PMID:30804566
InsomniaInsomnia associations | 
README
UK Biobank Sleep Traits GWAS: Self-report (chronotype associations)Genome-wide association analyses of chronotype in 697,828 individuals provides insights into circadian rhythms.
Jones SE, et al.
Nat Commun. 2019 Jan 29;10(1):343. doi: 10.1038/s41467-018-08259-7.
PMID:30696823
Chronotype

Chronotype (morningness) associations | README

Morning person (binary chronotype) associations | README

UK Biobank Sleep Traits GWAS: Self-report (sleep duration associations)Genome-wide association study identifies genetic loci for self-reported habitual sleep duration supported by accelerometer-derived estimates.
Dashti HS, et al.
Nat Commun. 2019 Mar 7;10(1):1100. doi: 10.1038/s41467-019-08917-4.
PMID:30846698
Sleep duration

Overall sleep duration associations | README

Long sleep duration associations | README

Short sleep duration associations | README

Obstructive sleep apnea GWASMultiethnic Meta-Analysis Identifies RAI1 as a Possible Obstructive Sleep Apnea-related Quantitative Trait Locus in Men.
Chen H, et al.
Am J Respir Cell Mol Biol. 2018 Mar;58(3):391-401. doi: 10.1165/rcmb.2017-0237OC.
PMID:29077507
Sleep apneaAHI - all associations
AHI - females
AHI - males
AHI - European Americans
AHI - European Americans, females
AHI - European Americans, males
AHI in NREM sleep - all associations
AHI in NREM sleep - females
AHI in NREM sleep - males
AHI in NREM sleep - European Americans
AHI in NREM sleep - European Americans, females
AHI in NREM sleep - European Americans, males
AHI in REM sleep - all associations
AHI in REM sleep - females
AHI in REM sleep - males
AHI in REM sleep - European Americans
AHI in REM sleep - European Americans, females
AHI in REM sleep - European Americans, males
EAGLE child sleep duration GWASHeritability and Genome-Wide Association Analyses of Sleep Duration in Children: The EAGLE Consortium.
Marinelli M, et al.

Sleep. 2016 Oct 1; 39(10): 1859–1869. doi: 10.5665/sleep.6170.
PMID:27568811
Child sleep durationDownload files